miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|90607393|gb|EB040834.1|EB040834 GAAAGAGTGGTGGGAGGTGAGGTGGCCAGACCCAACTCCTGGCCCTGGCAGATCTCTCTTCAGTACAAATCTGGAAGCGG
ATACCGCCACACATGTGGAGGAACCCTGATTGAGAGAGGCTGGGTTATGACTGCTGCTCACTGTGTGGACAGCCAGAGGA
CGTGGCGTGTTGTTATCGGTGAACATGACCTTTACAGCGACAGTGGCAGAGAGCAGATCATGGATGTCGTCCAAGTTTAC
ATCCATCCCGGATGGGACAGCAGCAGCGTCGGTAACGGGTGGGACATTGCTCTCCTGCGTATCTCCGCTGACGCCACCCC
GAACTCCTACGTCCAGCTGGGCTCGCTGCCTCCCATGGGCCAGATCCTGCCTCACAACAACCTCTGCTACGTCACCGGAT
GGGGACTCACCTCCACTGGTGGTAGCATATCTGCGCAGCTGAAACAGGCCTATCTTCCTCTGGTCGACCACAAGACCTGC
TCCAGCAGCAGCTGGTGGGGCAGCACTCTCAAGACCACCATGGTGTGTGGTGGTGGAGCTGCTGAGTCTGGATGCAATGG
TGACTCTGGTGGTCCTCTGAACTGCCTGGTTAATGGGAAATACTACGTCCATGGTATTGCCAGCTTTGTGTCCAGTAGTG
GATGCAATACTCCCAGGAAGCCCACCGTCTTCACCCGCGTGTCCGCCTACATCGACTGGATGGACTCGATCCTGGTGTAA
ACAAGAGTCCTCCATGCTGCAGGACACAGAGCACGTGTAACCCTGTTTTCATCTTCTGTGTCTTT




Most similar to sp|Q7SIG3|ELA1_SALSA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q7SIG3|ELA1_SALSA Elastase-1 OS=Salmo salar PE=1 SV=1
          Length = 236

 Score =  379 bits (973), Expect = e-104
 Identities = 172/236 (72%), Positives = 196/236 (83%)
 Frame = +1

Query: 7   VVGGEVARPNSWPWQISLQYKSGSGYRHTCGGTLIERGWVMTAAHCVDSQRTWRVVIGEH 186
           VVGG VA+PNSWPWQISLQYKSGS Y HTCGG+LI +GWVMTAAHCVDS RTWRVV+GEH
Sbjct: 1   VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSARTWRVVLGEH 60

Query: 187 DLYSDSGREQIMDVVQVYIHPGWDSSSVGNGWDIALLRISADATPNSYVQLGSLPPMGQI 366
           +L ++ G+EQIM V  V+IH GW+S  V  G+DIALLR++  A+ NS VQL +LPP  QI
Sbjct: 61  NLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQI 120

Query: 367 LPHNNLCYVTGWGLTSTGGSISAQLKQAYLPLVDHKTCSSSSWWGSTLKTTMVCGGGAAE 546
           LP+NN CY+TGWG TSTGG +S  LKQA+LP VDH TCSSS WWGST+KTTMVC GG A 
Sbjct: 121 LPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGGAN 180

Query: 547 SGCNGDSGGPLNCLVNGKYYVHGIASFVSSSGCNTPRKPTVFTRVSAYIDWMDSIL 714
           SGCNGDSGGPLNC VNG YYVHG+ SFVSSSGCN  +KPTVFTRVSAYI WM+ I+
Sbjct: 181 SGCNGDSGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNGIM 236